Package: VIGoR 1.1.5

VIGoR: Variational Bayesian Inference for Genome-Wide Regression

Conducts linear regression using variational Bayesian inference, particularly optimized for genome-wide association mapping and whole-genome prediction which use a number of DNA markers as the explanatory variables. Provides seven regression models which select the important variables (i.e., the variables related to response variables) among the given explanatory variables in different ways (i.e., model structures).

Authors:Akio Onogi [aut, cre, cph], Hiroyoshi Iwata [cph], Takuji Nishimura [ctb], Makoto Matsumoto [ctb], STRUCTURE software contributors [ctb], Alan Miller [ctb], Peter Beerli [ctb]

VIGoR_1.1.5.tar.gz
VIGoR_1.1.5.zip(r-4.7-x86_64)VIGoR_1.1.5.zip(r-4.7-arm64)VIGoR_1.1.5.zip(r-4.6-x86_64)VIGoR_1.1.5.zip(r-4.6-arm64)VIGoR_1.1.5.zip(r-4.5-x86_64)
VIGoR_1.1.5.tgz(r-4.6-x86_64)VIGoR_1.1.5.tgz(r-4.6-arm64)VIGoR_1.1.5.tgz(r-4.5-x86_64)VIGoR_1.1.5.tgz(r-4.5-arm64)
VIGoR_1.1.5.tar.gz(r-4.7-arm64)VIGoR_1.1.5.tar.gz(r-4.7-x86_64)VIGoR_1.1.5.tar.gz(r-4.6-arm64)VIGoR_1.1.5.tar.gz(r-4.6-x86_64)
VIGoR_1.1.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
VIGoR/json (API)

# Install 'VIGoR' in R:
install.packages('VIGoR', repos = c('https://onogi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/onogi/vigor/issues

Datasets:
  • X - An example of SNP genotypes
  • Y - An example of response variables.
  • Z - An example of fixed effects

On CRAN:

Conda:

3.00 score 1 stars 6 scripts 220 downloads 2 mentions 3 exports 0 dependencies

Last updated from:ba0086978e. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK70
linux-devel-x86_64OK93
source / vignettesOK127
linux-release-arm64OK112
linux-release-x86_64OK89
macos-release-arm64OK103
macos-release-x86_64OK243
macos-oldrel-arm64OK108
macos-oldrel-x86_64OK295
windows-devel-arm64OK418
windows-devel-x86_64OK99
windows-release-arm64OK314
windows-release-x86_64OK83
windows-oldrel-x86_64OK77
wasm-releaseOK84

Exports:hyperparapredict_vigorvigor

Dependencies: