Package: VIGoR 1.1.5

VIGoR: Variational Bayesian Inference for Genome-Wide Regression

Conducts linear regression using variational Bayesian inference, particularly optimized for genome-wide association mapping and whole-genome prediction which use a number of DNA markers as the explanatory variables. Provides seven regression models which select the important variables (i.e., the variables related to response variables) among the given explanatory variables in different ways (i.e., model structures).

Authors:Akio Onogi [aut, cre, cph], Hiroyoshi Iwata [cph], Takuji Nishimura [ctb], Makoto Matsumoto [ctb], STRUCTURE software contributors [ctb], Alan Miller [ctb], Peter Beerli [ctb]

VIGoR_1.1.5.tar.gz
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VIGoR.pdf |VIGoR.html
VIGoR/json (API)

# Install 'VIGoR' in R:
install.packages('VIGoR', repos = c('https://onogi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/onogi/vigor/issues

Datasets:
  • X - An example of SNP genotypes
  • Y - An example of response variables.
  • Z - An example of fixed effects

On CRAN:

Conda:

3.30 score 1 stars 7 scripts 302 downloads 2 mentions 3 exports 0 dependencies

Last updated 7 months agofrom:ba0086978e. Checks:12 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 10 2025
R-4.5-win-x86_64OKMar 10 2025
R-4.5-mac-x86_64OKMar 10 2025
R-4.5-mac-aarch64OKMar 10 2025
R-4.5-linux-x86_64OKMar 10 2025
R-4.4-win-x86_64OKMar 10 2025
R-4.4-mac-x86_64OKMar 10 2025
R-4.4-mac-aarch64OKMar 10 2025
R-4.4-linux-x86_64OKMar 10 2025
R-4.3-win-x86_64OKMar 10 2025
R-4.3-mac-x86_64OKMar 10 2025
R-4.3-mac-aarch64OKMar 10 2025

Exports:hyperparapredict_vigorvigor

Dependencies: